Finding the unloaded geometry#

from fenics_plotly import plot
import pulse
geometry = pulse.HeartGeometry.from_file(pulse.mesh_paths["simple_ellipsoid"])
# geometry = pulse.geometries.prolate_ellipsoid_geometry(mesh_size_factor=3.0)
material = pulse.NeoHookean()
# material = pulse.Guccione()
2023-09-05 11:57:02,570 [456] INFO     pulse.geometry_utils: 
Load mesh from h5
# Parameter for the cardiac boundary conditions
bcs_parameters = pulse.MechanicsProblem.default_bcs_parameters()
bcs_parameters["base_spring"] = 1.0
bcs_parameters["base_bc"] = "fix_x"
# Create the problem
problem = pulse.MechanicsProblem(geometry, material, bcs_parameters=bcs_parameters)
# Suppose geometry is loaded with a pressure of 1 kPa
# and create the unloader
unloader = pulse.FixedPointUnloader(problem=problem, pressure=3.0)
2023-09-05 11:57:02,747 [456] INFO     pulse.unloader: 

-------------------------- Unloading options ---------------------------

	Target pressure: 3.0
	maxiter = 10
	tolerance = 0.0001
	regenerate_fibers (serial only)= False

------------------------------------------------------------------------
# Unload the geometry
unloader.unload()
2023-09-05 11:57:02,754 [456] INFO     pulse.unloader: ------------------------------------------------------------------------
2023-09-05 11:57:02,754 [456] INFO     pulse.unloader: ----------------------------Start unloading-----------------------------
2023-09-05 11:57:02,755 [456] INFO     pulse.unloader: ------------------------------------------------------------------------
2023-09-05 11:57:02,762 [456] INFO     pulse.unloader: 
LV Volume of original geometry = 0.749 ml
2023-09-05 11:57:02,829 [456] INFO     pulse.unloader: 
Do an intial solve
2023-09-05 11:57:06,594 [456] INFO     pulse.unloader: 
Iteration: 0
2023-09-05 11:57:06,835 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:06,838 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:06,896 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:06,897 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:06,956 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:06,957 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:07,008 [456] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.568 ml
2023-09-05 11:57:10,862 [456] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.568 ml
2023-09-05 11:57:11,091 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:11,092 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:11,149 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:11,150 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:11,207 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:11,208 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:11,260 [456] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.717 ml
2023-09-05 11:57:11,275 [456] INFO     pulse.unloader: 
Residual:	0.011328623428538166
2023-09-05 11:57:11,275 [456] INFO     pulse.unloader: 
Iteration: 1
2023-09-05 11:57:11,505 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:11,507 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:11,565 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:11,567 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:11,624 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:11,627 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:11,679 [456] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.596 ml
2023-09-05 11:57:15,519 [456] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.596 ml
2023-09-05 11:57:15,748 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:15,750 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:15,808 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:15,809 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:15,870 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:15,872 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:15,923 [456] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.754 ml
2023-09-05 11:57:15,936 [456] INFO     pulse.unloader: 
Residual:	0.00169801021454042
2023-09-05 11:57:15,937 [456] INFO     pulse.unloader: 
Iteration: 2
2023-09-05 11:57:16,166 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:16,167 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:16,223 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:16,225 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:16,280 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:16,281 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:16,332 [456] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.592 ml
2023-09-05 11:57:20,170 [456] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.592 ml
2023-09-05 11:57:20,398 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:20,400 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:20,456 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:20,458 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:20,515 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:20,516 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:20,567 [456] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.749 ml
2023-09-05 11:57:20,580 [456] INFO     pulse.unloader: 
Residual:	0.0002592876931297134
2023-09-05 11:57:20,581 [456] INFO     pulse.unloader: 
Iteration: 3
2023-09-05 11:57:20,808 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:20,810 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:20,866 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:20,868 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:20,925 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:20,926 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:20,976 [456] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.593 ml
2023-09-05 11:57:24,824 [456] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.593 ml
2023-09-05 11:57:25,052 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:25,054 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:25,111 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:25,113 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:25,170 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:25,171 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:25,222 [456] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.750 ml
2023-09-05 11:57:25,236 [456] INFO     pulse.unloader: 
Residual:	3.931304295904103e-05
2023-09-05 11:57:25,237 [456] INFO     pulse.unloader: ########################################################################
Unloading suceeding
# Get the unloaded geometry
unloaded_geometry = unloader.unloaded_geometry
2023-09-05 11:57:25,473 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:25,474 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:25,536 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:25,537 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:25,594 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2023-09-05 11:57:25,595 [456] WARNING  py.warnings: /usr/lib/python3/dist-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
fig = plot(geometry.mesh, opacity=0.0, show=False)
fig.add_plot(plot(unloaded_geometry.mesh, color="red", show=False))
fig.show()